Name: Alan Hoyle
Type: User
Company: UNC Lineberger Comprehensive Cancer Center
Bio: Learning Bioinformatics on the job.
Location: Chapel Hill, NC, USA
Blog: http://alanhoyle.com/
abra
Assembly Based ReAligner
abra2
ABRA2
alanhoyle
Config files for my GitHub profile.
autojump
A cd command that learns - easily navigate directories from the command line
bedtools2
A powerful toolset for genome arithmetic.
bioconda-recipes
Conda recipes for the bioconda channel.
biosyntax
Syntax highlighting for computational biology
canvas
Canvas - Copy number variant (CNV) calling from DNA sequencing data
containers
Bioinformatics containers
datasciencecoursera
Coursera Data Sciences
datasharing
The Leek group guide to data sharing
diceware
Passphrases to remember
docker-bcl2fastq
Dockerfile for Illumina bcl2fastq
docker-images
Repository of Docker images created by Continuum Analytics
docker-linuxbrew-bio
Docker images of bioinformatics software built with Linuxbrew
duckypad
Do-It-All Mechanical Macropad
duckypad-macos
A duckyPad config for macOS with SQL commands
ensembl-vep
The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants
fastqc
A quality control analysis tool for high throughput sequencing data
fastvar
Some quick 'n dirty variant calling tools
freebayes
Bayesian haplotype-based genetic polymorphism discovery and genotyping.
gaptools
dbGaP data validation tool repo
gitignore
A collection of useful .gitignore templates
good-enough-project
A good enough project template for writing reproducible code
hyperjump
Hyperjump - simple and quick bookmark tool for bash
iterm2
iTerm2 is a terminal emulator for Mac OS X that does amazing things.
learngenomics.dev
A guided, intuitive introduction to genomics for software engineers. Curated by the community.
liquidprompt
A full-featured & carefully designed adaptive prompt for Bash & Zsh
lowcover
Report low coverage regions by e.g. gene given a coverage file and a targets definition file.
minimacro5
Macropad based on Arduino Pro Micro with support for combination of up to 5 rotary encoders or 5 mechanical switches
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
š Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. ššš
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ā¤ļø Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
