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Ipek's Projects

aup icon aup

Análisis aUtomático de Paneles

d3 icon d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

dmi_2021 icon dmi_2021

Repository with course materials for DMI 2021 Edition

javascript-algorithms icon javascript-algorithms

📝 Algorithms and data structures implemented in JavaScript with explanations and links to further readings

nextflow icon nextflow

A DSL for data-driven computational pipelines

pyhpo icon pyhpo

A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology

rnaseq icon rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

rnaseq_tutorial icon rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.

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