Name: Sergey Aganezov
Type: User
Company: @nanoporetech
Bio: Husband, Son, Ph.D., Senior Genomic Applications Scientist @nanoporetech. I'm fascinated about everything, that has something unknown in it! Views are my own.
Location: Cambridge, MA, USA
Sergey Aganezov's Projects
Personal website for Sergey Aganezov, PhD
CIGAR coordinate (re)mapper
Breakpoint graph implementation in Python programming language
Cat FASTQ files
A suite for Comparative Evolutionary Biology and Ancestral Reconstruction
The Python programming language
education studies
A workflow for SV inference allosing for multiple sequencing technologies and methods
The fast.ai course notebooks
Python driven scaffolding tool for multiple genomes represented as fragments with oriented gene orders
Multi-genemo gene order based assembler
Ensemble gene order processor
IntelliJ IDEA Community Edition
JetBrains GWU IDEA project with samples in Java
The JavaScript InfoVis Toolkit provides tools for creating Interactive Data Visualizations for the Web
Software for visualizing data from Hi-C and other proximity mapping experiments
The second version of the Kraken taxonomic sequence classification system
A lightweight library for converting complex objects to and from simple Python datatypes.
Official NetworkX source code repository.
Code samples in Python
Materials for the Learn PyTorch for Deep Learning: Zero to Mastery course.
RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes
Clone- and haplotype specific cancer karyotypes inferred with RCK on 17 prostate cancer samples