adulaney Goto Github PK

active_matter_ml

Machine learning phase behavior for motility induced phase separation in active systems.

adulaney.github.io

arena_2.0

Resources for skilling up in AI alignment research engineering. Covers basics of deep learning, mechanistic interpretability, and RL.

bootcamp

Caltech Introduction to Programming for the Biological Science Bootcamp

gtc2017-numba

Numba tutorial for GTC 2017 conference

hoomd-blue

HOOMD-blue is a general-purpose particle simulation toolkit. It scales from a single CPU core to thousands of GPUs.

na-utils

Bootcamp utilities for parsing nucleic acid sequences.

onedrive

OneDrive Client for Linux

qmk_firmware

Open-source keyboard firmware for Atmel AVR and Arm USB families

resume

resume

structure_factor

A module for computing static and dynamic structure factor from a GSD simulation script.

swsim

Solid Wave Simulation (swSim) is software that solves heterogeneous, anisotropic elastodynamic equations for ultrasonic NDE simulation. A time-explicit staggered grid finite difference (FD) scheme is employed and solved on graphics processing units (GPUs). Parallelism via the Message Passing Interface (MPI) allows for deployment on a cluster, or on a single computer with one or more GPUs. Wavefield data is output using Visualization Toolkit (VTK) file formats for 3D rendering capabilities via open source tools, and a kernel composition module allows high-level registration of sequences of matrix operations, providing extensibility in equations and physics solved.

thinkdsp

Think DSP: Digital Signal Processing in Python, by Allen B. Downey.