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analyzing_neural_time_series

python implementations of Analyzing Neural Time Series Textbook

brain-segmentation-pytorch

U-Net implementation in PyTorch for FLAIR abnormality segmentation in brain MRI

brain-tumor-mri-dataset

Utilities to download and load an MRI brain tumor dataset with Python, providing 2D slices, tumor masks and tumor classes.

brainiak

Brain Imaging Analysis Kit

code_contests

cs-video-courses

List of Computer Science courses with video lectures.

cursopythoncf

data-science-complete-tutorial

For extensive instructor led learning

devops_projects

dl_rnn_project

examples

TensorFlow examples

git-devops

Taller de GIT para bootcamp Devops

global2020

Brainhack Global 2020

hbayesdm

Hierarchical Bayesian modeling of RLDM tasks, using R & Python

hippocampal-volume-quantification-in-alzheimer-progression

Built an end-to-end AI system which features a deep learning algorithm that integrates into a clinical-grade viewer and automatically measures hippocampal volumes of new patients, as their studies are committed to the clinical imaging archive.

jidt

JIDT: Java Information Dynamics Toolkit for studying information-theoretic measures of computation in complex systems

leaddbs

Lead-DBS is a scientific toolbox facilitating deep brain stimulation electrode locations and connectomic imaging.

mridb

An end-to-end data management system for MRI

multipy

Multiple hypothesis testing in Python

neuralblack

A Multi-Class Brain Tumor Classifier using Convolutional Neural Network with 99% Accuracy achieved by applying the method of Transfer Learning using Python and Pytorch Deep Learning Framework

neurodocker

Generate custom Docker and Singularity images, and minimize existing containers

neuroml

A set of notebooks to introduce neuroscientists to concepts in machine learning.

proyecto

Proyecto deep learning redes convolucionales

proyecto_dl

pynetdicom

A Python implementation of the DICOM networking protocol

pytorchmedicalai

This is the hands-on deep learning tutorial series for the 2018/2019 Medical AI course by DeepOncology AI.

qc

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

qsiprep

Preprocessing and reconstruction of diffusion MRI

slicernetstim

Collection of 3D Slicer modules mainly focused on deep brain stimulation applications.

statsmodels

Statsmodels: statistical modeling and econometrics in Python