abrahamnunes Goto Github PK

abrahamnunes.github.io

My Jekyll blog

bddg-neuron

Dentate gyrus network model pattern separation and granule cell scaling in epilepsy (Yim et al 2015)

belt

My personal utility belt with functions I use commonly.

bioinformaticsalgorithms

Tutorials for CSCI 4181/6802 at Dalhousie University. Currently listing tutorials for winter term 2018.

characteristic-impairments-rl-bn

comorbidity_networks

Code at data for "The architecture of co-morbidity networks of physical and mental health conditions in military veterans", Proceedings of the Royal Society A, 2020

conductor.jl

Choo-choo

constrained-optimization-cognitive-models

Code for `The Importance of Constraint Smoothness for Parameter Estimation in Computational Cognitive Modeling`

criticism

A package for simulation-based criticism of machine-learning models.

distributions.jl

A Julia package for probability distributions and associated functions.

diversity

doing_bayesian_data_analysis

Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke

edward

A probabilistic programming language in TensorFlow. Deep generative models, variational inference.

fitr

Tools for computational psychiatry research.

fitr-old

A toolbox for computational psychiatry

gan_numpy

genoml

Analytical tools for genomics data in Python 3+.

gwasim

Evolve synthetic data for machine learning on genomic data.

intro_dgm

An Introduction to Deep Generative Modeling: Examples

ldscorejulia.jl

mmh

more-sagemath-tutorials

More SageMath Tutorials: A place to share and evolve tutorials for Sage, with the aim to contribute them to Sage

mst

Mnemonic Similarity Task

neuroimaging-tutorials

Tutorials on processing neuroimaging data with Python

neurosynth

Neurosynth core tools

newton-raphson

An implementation of logistic regression with the Newton-Raphson method.

notebooks

Jupyter notebooks for the Natural Language Processing with Transformers book

padamsey-et-al-neuron-2021

Padamsey*, Katsanevaki, Dupuy and Rochefort*

paradigms

A collection of experimental paradigms.

pqplot

Publication quality plots in matlab