aallyn Goto Github PK

2018_fsh556

Class materials for FSH556: Spatio-temporal models for ecologists in spring 2018 at UW

aallyn.github.io

adcomp

AD computation with Template Model Builder (TMB)

ahm_book

A repository for code associated with Kery and Royle Applied Hierarchical Modeling in Ecology (first edition)

coastal-ocean-climate-adaptation

Public repository for GMRI's coastal ocean and climate adaptation (COCA) project

coca

GMRI Coastal and Oceans Climate Applications work to map current and potential future fish distributions within the Northeast U.S. Large Marine Ecosystem

coca-ecoandecon

COCA code shared between ecology and economics team

coca-sdm

GMRI Coastal and Oceans Climate Applications work to map current and potential future fish distributions within the Northeast U.S. Large Marine Ecosystem

coca_19

Analyses to support COCA 19 project

coca_communityreports

Collection of functions and associated code to make COCA community report figures from SDM and SDM+Econ results.

coca_sdm_ms

Repository for COCA Quantitative SDM and Qualitative CVA methods paper (Allyn et al.)

coca_shelfwide

Analysis associated with the COCA NELME Shelfwide coupled ecological-social vulnerability assessment

coca_shiny

cv

Awesome CV in R. Based on the vitae package and Dominique Makowski’s template.

data-screencasts

Code from live exploratory analyses of data in R

ecw_fishclimate

A repository to support fitting and projecting SDMs within Bay of Funday and eastern Nova Scotian waters for

ef_activities

Hands-on activities associated with the Ecological Forecasting book and graduate class

fishstatsutils

Shared resources for spatio-temporal models

forecastingchallenge

gmri

Utility functions for the Gulf of Maine Research Institutes Research Team

gmri_rocker

groundfish-mse

Development of Robust Management Strategies for Northeast Groundfish Fisheries in a Changing Climate

labvingettes

me-nh-trawl-seagrant

physoce

A collection of functions and code to work with physical oceanographic data, especially sea surface temperature data from satellites and climate model projections

rsa

Investigating the causes and consequences of residual spatial correlation for species distribution models

sdmseasonality

Assessing how our decisions to account for "season" within species distribution models influences predictive skill for marine species exhibiting different migratory behaviors

sdmtmb

:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB

spde-smoothing

Paper and materials for the paper "Understanding the stochastic partial differential equation approach to smoothing"

stat_rethinking_2022

Statistical Rethinking course winter 2022